BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D02LP1|AL425516
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig984 1886 0.0
>3x_Contig984
Length = 4208
Score = 1886 bits (949), Expect = 0.0
Identities = 986/997 (98%), Gaps = 3/997 (0%)
Strand = Plus / Minus
Query: 1 gatcaacaagacgagacaaagagccaaggctcaagctcaacagaaagcatctcaattcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2239 gatcaacaagacgagacaaagagccaaggctcaagctcaacagaaagcatctcaattcta 2180
Query: 61 ctaccatcaacgcaacctttctgcatgttccagcactgctacactgctagggaacagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2179 ctaccatcaacgcaacctttctgcatgttccagcactgctacactgctagggaacagcag 2120
Query: 121 gagtggatccattaacagtttggatatactgaaggaatacgaatcgtcatcgtcgtcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2119 gagtggatccattaacagtttggatatactgaaggaatacgaatcgtcatcgtcgtcgtc 2060
Query: 181 atcatcgacactgtcatctccgacatacaccgaggaaatgaactacaagaagtatacgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 atcatcgacactgtcatctccgacatacaccgaggaaatgaactacaagaagtatacgat 2000
Query: 241 ggatcctcggtactataacactgtacggccggtacagcacaccgaccctacaatatacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1999 ggatcctcggtactataacactgtacggccggtacagcacaccgaccctacaatatacac 1940
Query: 301 ataacagtagcttttaaatataatagtgctagataacaaggggtgtgtgtgcccttggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1939 ataacagtagcttttaaatataatagtgctagataacaaggggtgtgtgtgcccttggtc 1880
Query: 361 acctagcatggctcatcgcattaggcgatgccctataatcaatatggaaacggatttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 acctagcatggctcatcgcattaggcgatgccctataatcaatatggaaacggatttctt 1820
Query: 421 tacatctactgtcccgggtaacttttcccaagcaaaaatttttcacttcctaaatttgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 tacatctactgtcccgggtaacttttcccaagcaaaaatttttcacttcctaaatttgta 1760
Query: 481 taaatagaggcaggtcctctgcactaagtacatatattacttgttaatgagcattttaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 taaatagaggcaggtcctctgcactaagtacatatattacttgttaatgagcattttaca 1700
Query: 541 gatatatatgaagctgaaaagagcaggcaacaactaccaacatcgggcgatgttggagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 gatatatatgaagctgaaaagagcaggcaacaactaccaacatcgggcgatgttggagtt 1640
Query: 601 agtgttgaaggcacatcagtaacaaggtcgcgataagtatattgcgtcttgaggttccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 agtgttgaaggcacatcagtaacaaggtcgcgataagtatattgcgtcttgaggttccaa 1580
Query: 661 agacgagagaaacgctgtgcaccagtctgaacgtgctaaaatgtactctagcactctgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 agacgagagaaacgctgtgcaccagtctgaacgtgctaaaatgtactctagcactctgaa 1520
Query: 721 gcattaagtatacccaaatttctgaggaacgtttactgagaggcctgcaagtttgtattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 gcattaagtatacccaaatttctgaggaacgtttactgagaggcctgcaagtttgtattt 1460
Query: 781 aagaaaactgtatttwagaaaccgtactaggagcaacggcctcgctagagstgtntnctt 840
||||||||||||||| |||||||||||||||||||||||||||||||||| | | |
Sbjct: 1459 aagaaaactgtatttaagaaaccgtactaggagcaacggcctcgctagaggccgtttc-t 1401
Query: 841 ttgatatgatagccaatgtcacgtgatgccaaaaatccgttccatacaaaatataagaha 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1400 ttgatatgatagccaatgtcacgtgatgccaaaaatccgttccatacaaaatataagaaa 1341
Query: 901 aagagtatcacgtgatggtacaccatcacgtgacgtaaacaaccctcaaagctgcgtgtt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 aagagtatcacgtgatggtacaccatcacgtgacgtaaacaaccctcaaagctgcgtgtt 1281
Query: 961 atatagcgcc-accgggaa-accgctatccgcgtcgt 995
|||||||||| |||||||| |||||||||||||||||
Sbjct: 1280 atatagcgccaaccgggaacaccgctatccgcgtcgt 1244
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6112
Number of Sequences: 1807
Number of extensions: 6112
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)